Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sama_1092 | Sama_1847 | Sama_1092 | Sama_1847 | KEGG: son:SO1583 hypothetical protein. | KEGG: sdn:Sden_1891 protein of unknown function DUF785. | 0.456 |
Sama_1092 | rimK1 | Sama_1092 | Sama_1299 | KEGG: son:SO1583 hypothetical protein. | KEGG: son:SO2270 ribosomal protein S6 modification protein. | 0.766 |
Sama_1298 | hscA | Sama_1298 | Sama_1297 | KEGG: son:SO2269 ferredoxin, 2Fe-2S. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.976 |
Sama_1298 | rimK1 | Sama_1298 | Sama_1299 | KEGG: son:SO2269 ferredoxin, 2Fe-2S. | KEGG: son:SO2270 ribosomal protein S6 modification protein. | 0.470 |
Sama_1300 | rimK1 | Sama_1300 | Sama_1299 | KEGG: sfr:Sfri_2114 hypothetical protein. | KEGG: son:SO2270 ribosomal protein S6 modification protein. | 0.472 |
Sama_1847 | Sama_1092 | Sama_1847 | Sama_1092 | KEGG: sdn:Sden_1891 protein of unknown function DUF785. | KEGG: son:SO1583 hypothetical protein. | 0.456 |
Sama_1847 | rimK1 | Sama_1847 | Sama_1299 | KEGG: sdn:Sden_1891 protein of unknown function DUF785. | KEGG: son:SO2270 ribosomal protein S6 modification protein. | 0.651 |
Sama_1956 | rimK1 | Sama_1956 | Sama_1299 | KEGG: sdn:Sden_2273 protein of unknown function DUF785. | KEGG: son:SO2270 ribosomal protein S6 modification protein. | 0.657 |
hscA | Sama_1298 | Sama_1297 | Sama_1298 | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | KEGG: son:SO2269 ferredoxin, 2Fe-2S. | 0.976 |
hscA | rimK1 | Sama_1297 | Sama_1299 | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | KEGG: son:SO2270 ribosomal protein S6 modification protein. | 0.476 |
rimK1 | Sama_1092 | Sama_1299 | Sama_1092 | KEGG: son:SO2270 ribosomal protein S6 modification protein. | KEGG: son:SO1583 hypothetical protein. | 0.766 |
rimK1 | Sama_1298 | Sama_1299 | Sama_1298 | KEGG: son:SO2270 ribosomal protein S6 modification protein. | KEGG: son:SO2269 ferredoxin, 2Fe-2S. | 0.470 |
rimK1 | Sama_1300 | Sama_1299 | Sama_1300 | KEGG: son:SO2270 ribosomal protein S6 modification protein. | KEGG: sfr:Sfri_2114 hypothetical protein. | 0.472 |
rimK1 | Sama_1847 | Sama_1299 | Sama_1847 | KEGG: son:SO2270 ribosomal protein S6 modification protein. | KEGG: sdn:Sden_1891 protein of unknown function DUF785. | 0.651 |
rimK1 | Sama_1956 | Sama_1299 | Sama_1956 | KEGG: son:SO2270 ribosomal protein S6 modification protein. | KEGG: sdn:Sden_2273 protein of unknown function DUF785. | 0.657 |
rimK1 | hscA | Sama_1299 | Sama_1297 | KEGG: son:SO2270 ribosomal protein S6 modification protein. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.476 |