STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)    
Predicted Functional Partners:
Sama_1494
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
 
 
 0.999
Sama_1364
KEGG: mag:amb2304 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
   
 
 0.925
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.925
Sama_3435
KEGG: son:SO4480 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.916
acyP
Acylphosphatase; KEGG: son:SO2253 acylphosphatase.
     
 0.910
Sama_0915
Phosphoketolase; KEGG: son:SO3542 putative phosphoketolase.
  
 0.855
Sama_2380
KEGG: son:SO1484 isocitrate lyase.
   
  
 0.777
Sama_1665
KEGG: vvu:VV11395 hypothetical protein.
 
     0.690
sfsA
KEGG: sdn:Sden_3169 sugar fermentation stimulation protein; Belongs to the SfsA family.
 
      0.613
Sama_2443
KEGG: son:SO1518 hypothetical protein.
  
  
 0.597
Your Current Organism:
Shewanella amazonensis
NCBI taxonomy Id: 326297
Other names: S. amazonensis SB2B, Shewanella amazonensis SB2B, Shewanella amazonensis str. SB2B, Shewanella amazonensis strain SB2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.