Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sama_3399 | Sama_3400 | Sama_3399 | Sama_3400 | Hypothetical protein. | Trypsin-like serine protease; KEGG: mag:amb2240 TPR repeat; typically periplasmic; contain C-terminal PDZ domain. | 0.781 |
Sama_3399 | azoR | Sama_3399 | Sama_3398 | Hypothetical protein. | (Acyl-carrier-protein) phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.471 |
Sama_3400 | Sama_3399 | Sama_3400 | Sama_3399 | Trypsin-like serine protease; KEGG: mag:amb2240 TPR repeat; typically periplasmic; contain C-terminal PDZ domain. | Hypothetical protein. | 0.781 |
Sama_3400 | azoR | Sama_3400 | Sama_3398 | Trypsin-like serine protease; KEGG: mag:amb2240 TPR repeat; typically periplasmic; contain C-terminal PDZ domain. | (Acyl-carrier-protein) phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.469 |
azoR | Sama_3399 | Sama_3398 | Sama_3399 | (Acyl-carrier-protein) phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Hypothetical protein. | 0.471 |
azoR | Sama_3400 | Sama_3398 | Sama_3400 | (Acyl-carrier-protein) phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Trypsin-like serine protease; KEGG: mag:amb2240 TPR repeat; typically periplasmic; contain C-terminal PDZ domain. | 0.469 |
azoR | queG | Sama_3398 | Sama_2625 | (Acyl-carrier-protein) phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Iron-sulfur cluster-binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | 0.608 |
queG | azoR | Sama_2625 | Sama_3398 | Iron-sulfur cluster-binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | (Acyl-carrier-protein) phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.608 |