STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sama_3548KEGG: son:SO4697 glutathione S-transferase. (217 aa)    
Predicted Functional Partners:
Sama_2509
KEGG: sdn:Sden_0739 glutathione S-transferase-like protein.
 
 
  0.944
Sama_0664
KEGG: son:SO0746 glutathione S-transferase family protein.
  
  
  0.943
Sama_0682
KEGG: eca:ECA2791 putative glutathione S-transferase.
  
 
  0.920
gshB
KEGG: son:SO0831 glutathione synthase; Belongs to the prokaryotic GSH synthase family.
  
  
  0.918
Sama_3513
Antioxidant, AhpC/Tsa family; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
  
 
  0.918
Sama_3543
KEGG: son:SO4702 glutathione reductase.
   
 0.908
Sama_1080
KEGG: bce:BC2114 glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.904
Sama_2474
KEGG: son:SO3349 glutathione peroxidase, putative; Belongs to the glutathione peroxidase family.
   
 
 0.904
Sama_0669
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03; KEGG: son:SO0741 gamma-glutamyltranspeptidase.
     
 0.901
Sama_1566
Gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03; KEGG: sdn:Sden_1655 gamma-glutamyltransferase.
     
 0.901
Your Current Organism:
Shewanella amazonensis
NCBI taxonomy Id: 326297
Other names: S. amazonensis SB2B, Shewanella amazonensis SB2B, Shewanella amazonensis str. SB2B, Shewanella amazonensis strain SB2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.