STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB43324.1Methyl-accepting chemotaxis sensory transducer. (421 aa)    
Predicted Functional Partners:
ABB44807.1
CheA signal transduction histidine kinases.
 
 
 0.964
ABB44797.1
Putative PAS/PAC sensor protein.
 
 
 0.913
ABB44929.1
Putative PAS/PAC sensor protein.
 
 
 0.913
ABB44535.1
Response regulator receiver (CheY-like) modulated CheW protein.
 
 
 0.905
ABB44806.1
CheW protein.
 
 
 0.872
ABB44252.1
CheA signal transduction histidine kinases.
 
 
 0.861
ABB44832.1
Putative CheA signal transduction histidine kinases.
 
 
 0.861
ABB43325.1
Putative PAS/PAC sensor protein.
 
 
 0.857
ABB45214.1
MCP methyltransferase, CheR-type.
 
 
 0.839
ABB45213.1
CheB methylesterase.
 
 
 0.837
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.