STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB43477.1Hypothetical protein. (509 aa)    
Predicted Functional Partners:
ABB43480.1
Hypothetical protein.
       0.777
ABB43481.1
Asparagine synthase, glutamine-hydrolyzing.
       0.775
ABB43472.1
Glycosyl transferase, group 1.
       0.773
ABB43473.1
Conserved hypothetical protein.
       0.773
ABB43474.1
Glycosyl transferase, group 1.
       0.773
ABB43475.1
Hypothetical protein.
       0.773
ABB43476.1
Radical SAM.
       0.773
ABB43478.1
Radical SAM.
       0.773
ABB43479.1
Methylase involved in ubiquinone/menaquinone biosynthesis-like protein.
       0.773
ABB43482.1
Hypothetical protein.
       0.773
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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