STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmhAPhosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (195 aa)    
Predicted Functional Partners:
ABB43853.1
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase.
  
 0.997
hldE
D-beta-D-heptose 1-phosphate adenylyltransferase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family.
  
 0.994
ABB43465.1
Sugar isomerase (SIS).
  
  
 
0.919
ABB44696.1
Glycosyl transferase, group 1.
 
  
 0.900
ABB43854.1
Asparaginase.
       0.781
ABB43855.1
Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase.
       0.774
ABB43856.1
Cytochrome oxidase maturation protein cbb3-type.
       0.773
ABB43861.1
Lipopolysaccharide heptosyltransferase II.
 
   
 0.671
ABB43457.1
Cytidyltransferase-related; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
   
 0.636
ABB43494.1
KpsF/GutQ; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.546
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.