STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB43994.1Diguanylate cyclase (GGDEF domain). (516 aa)    
Predicted Functional Partners:
ABB44014.1
Diguanylate cyclase/phosphodiesterase.
  
 0.842
ABB43387.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
 0.831
ABB45215.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
 0.823
ABB43661.1
Diguanylate cyclase/phosphodiesterase.
    0.807
ABB44635.1
Diguanylate cyclase/phosphodiesterase.
 
    0.797
ABB44017.1
Diguanylate cyclase (GGDEF domain).
  
     0.775
ABB43529.1
Histidine kinase.
 
  
 0.721
ABB44262.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
 0.706
ABB44164.1
Metal dependent phosphohydrolase.
 
 
 0.660
ABB43896.1
PAS/PAC sensor hybrid histidine kinase.
 
  
 0.657
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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