Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB43850.1 | ABB44532.1 | Suden_0571 | Suden_1254 | ATP-dependent citrate lyase alpha subunit. | Acetylornithine aminotransferase. | 0.621 |
ABB43850.1 | ABB44537.1 | Suden_0571 | Suden_1259 | ATP-dependent citrate lyase alpha subunit. | Pyruvate carboxylase/oxaloacetate decarboxylase beta subunit. | 0.961 |
ABB43850.1 | ABB45369.1 | Suden_0571 | Suden_2095 | ATP-dependent citrate lyase alpha subunit. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.866 |
ABB43850.1 | argG | Suden_0571 | Suden_1373 | ATP-dependent citrate lyase alpha subunit. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.459 |
ABB43850.1 | argH | Suden_0571 | Suden_0866 | ATP-dependent citrate lyase alpha subunit. | Argininosuccinate lyase. | 0.886 |
ABB43850.1 | argJ | Suden_0571 | Suden_1600 | ATP-dependent citrate lyase alpha subunit. | N-acetylglutamate synthase / glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.422 |
ABB43850.1 | mdh | Suden_0571 | Suden_1048 | ATP-dependent citrate lyase alpha subunit. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.999 |
ABB44532.1 | ABB43850.1 | Suden_1254 | Suden_0571 | Acetylornithine aminotransferase. | ATP-dependent citrate lyase alpha subunit. | 0.621 |
ABB44532.1 | argB | Suden_1254 | Suden_0854 | Acetylornithine aminotransferase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.996 |
ABB44532.1 | argC | Suden_1254 | Suden_1533 | Acetylornithine aminotransferase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.996 |
ABB44532.1 | argF | Suden_1254 | Suden_0386 | Acetylornithine aminotransferase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.986 |
ABB44532.1 | argG | Suden_1254 | Suden_1373 | Acetylornithine aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.910 |
ABB44532.1 | argH | Suden_1254 | Suden_0866 | Acetylornithine aminotransferase. | Argininosuccinate lyase. | 0.924 |
ABB44532.1 | argJ | Suden_1254 | Suden_1600 | Acetylornithine aminotransferase. | N-acetylglutamate synthase / glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.996 |
ABB44537.1 | ABB43850.1 | Suden_1259 | Suden_0571 | Pyruvate carboxylase/oxaloacetate decarboxylase beta subunit. | ATP-dependent citrate lyase alpha subunit. | 0.961 |
ABB44537.1 | ABB45369.1 | Suden_1259 | Suden_2095 | Pyruvate carboxylase/oxaloacetate decarboxylase beta subunit. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.820 |
ABB44537.1 | argH | Suden_1259 | Suden_0866 | Pyruvate carboxylase/oxaloacetate decarboxylase beta subunit. | Argininosuccinate lyase. | 0.846 |
ABB44537.1 | mdh | Suden_1259 | Suden_1048 | Pyruvate carboxylase/oxaloacetate decarboxylase beta subunit. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.955 |
ABB45369.1 | ABB43850.1 | Suden_2095 | Suden_0571 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | ATP-dependent citrate lyase alpha subunit. | 0.866 |
ABB45369.1 | ABB44537.1 | Suden_2095 | Suden_1259 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Pyruvate carboxylase/oxaloacetate decarboxylase beta subunit. | 0.820 |
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