Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB44357.1 | ABB44360.1 | Suden_1079 | Suden_1082 | Phosphatase kdsC. | Lytic transglycosylase, catalytic. | 0.793 |
ABB44357.1 | ABB44361.1 | Suden_1079 | Suden_1083 | Phosphatase kdsC. | TatD-related deoxyribonuclease. | 0.594 |
ABB44357.1 | ABB44362.1 | Suden_1079 | Suden_1084 | Phosphatase kdsC. | ATPase; May be involved in recombinational repair of damaged DNA. | 0.531 |
ABB44357.1 | nadK | Suden_1079 | Suden_1085 | Phosphatase kdsC. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.538 |
ABB44360.1 | ABB44357.1 | Suden_1082 | Suden_1079 | Lytic transglycosylase, catalytic. | Phosphatase kdsC. | 0.793 |
ABB44360.1 | ABB44361.1 | Suden_1082 | Suden_1083 | Lytic transglycosylase, catalytic. | TatD-related deoxyribonuclease. | 0.664 |
ABB44360.1 | ABB44362.1 | Suden_1082 | Suden_1084 | Lytic transglycosylase, catalytic. | ATPase; May be involved in recombinational repair of damaged DNA. | 0.633 |
ABB44360.1 | aspS | Suden_1082 | Suden_1086 | Lytic transglycosylase, catalytic. | aspartate--tRNA(Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.467 |
ABB44360.1 | nadK | Suden_1082 | Suden_1085 | Lytic transglycosylase, catalytic. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.674 |
ABB44361.1 | ABB44357.1 | Suden_1083 | Suden_1079 | TatD-related deoxyribonuclease. | Phosphatase kdsC. | 0.594 |
ABB44361.1 | ABB44360.1 | Suden_1083 | Suden_1082 | TatD-related deoxyribonuclease. | Lytic transglycosylase, catalytic. | 0.664 |
ABB44361.1 | ABB44362.1 | Suden_1083 | Suden_1084 | TatD-related deoxyribonuclease. | ATPase; May be involved in recombinational repair of damaged DNA. | 0.791 |
ABB44361.1 | aspS | Suden_1083 | Suden_1086 | TatD-related deoxyribonuclease. | aspartate--tRNA(Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.517 |
ABB44361.1 | nadK | Suden_1083 | Suden_1085 | TatD-related deoxyribonuclease. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.652 |
ABB44362.1 | ABB44357.1 | Suden_1084 | Suden_1079 | ATPase; May be involved in recombinational repair of damaged DNA. | Phosphatase kdsC. | 0.531 |
ABB44362.1 | ABB44360.1 | Suden_1084 | Suden_1082 | ATPase; May be involved in recombinational repair of damaged DNA. | Lytic transglycosylase, catalytic. | 0.633 |
ABB44362.1 | ABB44361.1 | Suden_1084 | Suden_1083 | ATPase; May be involved in recombinational repair of damaged DNA. | TatD-related deoxyribonuclease. | 0.791 |
ABB44362.1 | aspS | Suden_1084 | Suden_1086 | ATPase; May be involved in recombinational repair of damaged DNA. | aspartate--tRNA(Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.484 |
ABB44362.1 | nadK | Suden_1084 | Suden_1085 | ATPase; May be involved in recombinational repair of damaged DNA. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.851 |
aspS | ABB44360.1 | Suden_1086 | Suden_1082 | aspartate--tRNA(Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Lytic transglycosylase, catalytic. | 0.467 |
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