Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB43529.1 | ABB44613.1 | Suden_0248 | Suden_1335 | Histidine kinase. | Conserved hypothetical protein. | 0.562 |
ABB43529.1 | ABB45157.1 | Suden_0248 | Suden_1883 | Histidine kinase. | Periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.579 |
ABB43529.1 | ABB45159.1 | Suden_0248 | Suden_1885 | Histidine kinase. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.528 |
ABB43529.1 | ABB45160.1 | Suden_0248 | Suden_1886 | Histidine kinase. | Phosphate transport system permease protein 2. | 0.554 |
ABB43529.1 | ABB45162.1 | Suden_0248 | Suden_1888 | Histidine kinase. | Phosphate uptake regulator-like protein. | 0.555 |
ABB43529.1 | ABB45163.1 | Suden_0248 | Suden_1889 | Histidine kinase. | L-glutamine synthetase. | 0.625 |
ABB43529.1 | guaA | Suden_0248 | Suden_0422 | Histidine kinase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.551 |
ABB43529.1 | pstB | Suden_0248 | Suden_1887 | Histidine kinase. | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.560 |
ABB44613.1 | ABB43529.1 | Suden_1335 | Suden_0248 | Conserved hypothetical protein. | Histidine kinase. | 0.562 |
ABB44613.1 | ABB45159.1 | Suden_1335 | Suden_1885 | Conserved hypothetical protein. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.838 |
ABB44613.1 | ABB45160.1 | Suden_1335 | Suden_1886 | Conserved hypothetical protein. | Phosphate transport system permease protein 2. | 0.838 |
ABB44613.1 | ABB45162.1 | Suden_1335 | Suden_1888 | Conserved hypothetical protein. | Phosphate uptake regulator-like protein. | 0.478 |
ABB44613.1 | guaA | Suden_1335 | Suden_0422 | Conserved hypothetical protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.525 |
ABB44613.1 | pstB | Suden_1335 | Suden_1887 | Conserved hypothetical protein. | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.837 |
ABB45157.1 | ABB43529.1 | Suden_1883 | Suden_0248 | Periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Histidine kinase. | 0.579 |
ABB45157.1 | ABB45158.1 | Suden_1883 | Suden_1884 | Periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Protein of unknown function DUF344. | 0.682 |
ABB45157.1 | ABB45159.1 | Suden_1883 | Suden_1885 | Periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
ABB45157.1 | ABB45160.1 | Suden_1883 | Suden_1886 | Periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Phosphate transport system permease protein 2. | 0.999 |
ABB45157.1 | ABB45162.1 | Suden_1883 | Suden_1888 | Periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Phosphate uptake regulator-like protein. | 0.749 |
ABB45157.1 | ABB45163.1 | Suden_1883 | Suden_1889 | Periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | L-glutamine synthetase. | 0.567 |
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