Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FRAAL1131 | azoR | FRAAL1131 | FRAAL1130 | Putative MarR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. | Putative acyl carrier protein phosphodiesterase (ACP phosphodiesterase); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.646 |
FRAAL4133 | azoR | FRAAL4133 | FRAAL1130 | Putative glutathione S-transferase enzyme with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative acyl carrier protein phosphodiesterase (ACP phosphodiesterase); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.466 |
FRAAL5596 | azoR | FRAAL5596 | FRAAL1130 | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the LysR transcriptional regulatory family. | Putative acyl carrier protein phosphodiesterase (ACP phosphodiesterase); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.455 |
azoR | FRAAL1131 | FRAAL1130 | FRAAL1131 | Putative acyl carrier protein phosphodiesterase (ACP phosphodiesterase); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Putative MarR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. | 0.646 |
azoR | FRAAL4133 | FRAAL1130 | FRAAL4133 | Putative acyl carrier protein phosphodiesterase (ACP phosphodiesterase); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Putative glutathione S-transferase enzyme with thioredoxin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.466 |
azoR | FRAAL5596 | FRAAL1130 | FRAAL5596 | Putative acyl carrier protein phosphodiesterase (ACP phosphodiesterase); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the LysR transcriptional regulatory family. | 0.455 |