STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL1297Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (417 aa)    
Predicted Functional Partners:
FRAAL1298
Putative regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
 0.950
FRAAL1299
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.927
FRAAL1300
Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.926
FRAAL1301
Putative integral membrane protein; No homology to any previously reported sequences.
 
     0.904
FRAAL1290
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.842
FRAAL1284
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.801
purD
Phosphoribosylglycinamide synthetase (GAR synthetase); Function of strongly homologous gene; enzyme; Belongs to the GARS family.
     
 0.618
egtD
Conserved hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
      
 0.615
FRAAL0273
Putative dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
      
 0.557
citE
Citrate lyase subunit beta / citryl-CoA lyase; Function of strongly homologous gene; enzyme; Belongs to the HpcH/HpaI aldolase family.
      
 0.552
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.