STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL1345Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (241 aa)    
Predicted Functional Partners:
FRAAL1346
Antibiotic resistance ATP-binding protein; Function of strongly homologous gene; transporter.
  
 0.952
FRAAL2549
Antibiotic resistance ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier.
  
 0.858
FRAAL5527
Antibiotic resistance ATP-binding protein; Function of strongly homologous gene; enzyme.
  
 0.849
FRAAL2276
Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.848
FRAAL4461
Putative antibiotic ABC transport system ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.848
FRAAL2550
ABC transporter system integral membrane protein; Function of strongly homologous gene; transporter.
 
 
0.743
FRAAL4569
Putative integral membrane transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
  
  0.695
FRAAL2212
Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.659
FRAAL4460
Putative ABC-transporter transmembrane component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
  
 
0.494
FRAAL4568
Putative ABC transporter, ATP-binding subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.477
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.