STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL3895Putative serine/threonine-protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (761 aa)    
Predicted Functional Partners:
FRAAL2271
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 
 0.929
FRAAL3891
Putative secreted protein; No homology to any previously reported sequences.
 
  
 0.924
FRAAL3896
Putative protein phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.914
FRAAL3897
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.899
FRAAL4332
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.893
FRAAL3898
Hypothetical protein; No homology to any previously reported sequences.
 
 
 
 0.870
FRAAL3893
Putative ABC transporter glutamine-binding protein GlnH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.846
FRAAL6518
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.831
FRAAL6520
Hypothetical protein;putative SMAD/FHA domain; No homology to any previously reported sequences.
 
 
 
 0.819
FRAAL6519
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.800
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.