STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5284Hypothetical protein (contains a putative transcriptional regulatory domain); No homology to any previously reported sequences. (436 aa)    
Predicted Functional Partners:
FRAAL1318
Putative Two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
 
 0.879
FRAAL4194
Putative hybrid sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.876
FRAAL3242
Putative sensor histidine kinase with multiple PAS and a response regulator receiver domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.864
FRAAL5907
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.847
FRAAL4047
Putative two-component sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.832
FRAAL5008
Putative two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.828
FRAAL3820
Putative transmembrane sensory transduction histidine kinase for metal resistance; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.819
FRAAL6414
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.793
FRAAL5007
Two-component system response regulator; Function of strongly homologous gene; regulator.
  
     0.773
FRAAL3162
Putative two-component system response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.772
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.