STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL6482Hypothetical protein; No homology to any previously reported sequences. (408 aa)    
Predicted Functional Partners:
FRAAL6484
Conserved hypothetical protein; No homology to any previously reported sequences.
 
    0.912
FRAAL6483
Hypothetical protein; No homology to any previously reported sequences.
       0.634
FRAAL6485
Hypothetical protein; No homology to any previously reported sequences.
     
 0.611
FRAAL2036
Putative bi-domain oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.606
FRAAL4277
Hypothetical protein; No homology to any previously reported sequences.
    
 0.542
FRAAL4377
Putative WD-repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.510
FRAAL0225
Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 0.456
FRAAL0230
Hypothetical protein; No homology to any previously reported sequences.
   
 0.456
groL-3
Chaperone Hsp60 (GroEL), part of GroE chaperone system; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.448
FRAAL3954
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.443
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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