STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cagg_1526KEGG: cau:Caur_2137 hypothetical protein. (201 aa)    
Predicted Functional Partners:
Cagg_1522
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.996
Cagg_1527
KEGG: cau:Caur_2136 Fe-S-cluster-containing hydrogenase components 1-like protein.
 
 
 0.996
Cagg_3386
KEGG: cau:Caur_0622 Fe-S-cluster-containing hydrogenase components 1-like protein.
 
 
 0.992
Cagg_1520
PFAM: cytochrome c oxidase subunit III; KEGG: cau:Caur_2143 cytochrome c oxidase subunit III.
 
 
 0.991
Cagg_1525
KEGG: cau:Caur_2138 hypothetical protein.
 
 
 0.979
Cagg_3384
KEGG: cau:Caur_0624 transmembrane prediction.
 
     0.974
Cagg_0378
TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ttj:TTHB128 arsenite oxidase, small subunit.
  
 
 0.965
Cagg_3385
PFAM: Polysulphide reductase NrfD; KEGG: cau:Caur_0623 polysulphide reductase NrfD.
 
 
 
 0.963
Cagg_1521
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 
 0.961
Cagg_3382
KEGG: cau:Caur_0626 hypothetical protein.
 
 
 0.953
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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