node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cagg_1887 | dinG | Cagg_1887 | Cagg_2156 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cau:Caur_1134 single-stranded-DNA-specific exonuclease RecJ. | DNA polymerase III, epsilon subunit; 3'-5' exonuclease. | 0.483 |
Cagg_1887 | polA | Cagg_1887 | Cagg_3590 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cau:Caur_1134 single-stranded-DNA-specific exonuclease RecJ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.535 |
Cagg_1887 | ruvB | Cagg_1887 | Cagg_0868 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cau:Caur_1134 single-stranded-DNA-specific exonuclease RecJ. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.416 |
Cagg_1887 | ruvC | Cagg_1887 | Cagg_2595 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cau:Caur_1134 single-stranded-DNA-specific exonuclease RecJ. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.515 |
Cagg_2306 | ruvC | Cagg_2306 | Cagg_2595 | KEGG: cau:Caur_1366 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.525 |
Cagg_2593 | Cagg_2594 | Cagg_2593 | Cagg_2594 | PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: cau:Caur_1042 cyclic nucleotide-binding. | PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein. | 0.590 |
Cagg_2593 | dinG | Cagg_2593 | Cagg_2156 | PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: cau:Caur_1042 cyclic nucleotide-binding. | DNA polymerase III, epsilon subunit; 3'-5' exonuclease. | 0.527 |
Cagg_2593 | polA | Cagg_2593 | Cagg_3590 | PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: cau:Caur_1042 cyclic nucleotide-binding. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.441 |
Cagg_2593 | ruvC | Cagg_2593 | Cagg_2595 | PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: cau:Caur_1042 cyclic nucleotide-binding. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.603 |
Cagg_2594 | Cagg_2593 | Cagg_2594 | Cagg_2593 | PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein. | PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: cau:Caur_1042 cyclic nucleotide-binding. | 0.590 |
Cagg_2594 | Cagg_2596 | Cagg_2594 | Cagg_2596 | PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein. | KEGG: cau:Caur_1045 hypothetical protein. | 0.497 |
Cagg_2594 | polA | Cagg_2594 | Cagg_3590 | PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.426 |
Cagg_2594 | ruvA | Cagg_2594 | Cagg_2134 | PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.435 |
Cagg_2594 | ruvC | Cagg_2594 | Cagg_2595 | PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.851 |
Cagg_2596 | Cagg_2594 | Cagg_2596 | Cagg_2594 | KEGG: cau:Caur_1045 hypothetical protein. | PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein. | 0.497 |
Cagg_2596 | ruvC | Cagg_2596 | Cagg_2595 | KEGG: cau:Caur_1045 hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.582 |
dinG | Cagg_1887 | Cagg_2156 | Cagg_1887 | DNA polymerase III, epsilon subunit; 3'-5' exonuclease. | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cau:Caur_1134 single-stranded-DNA-specific exonuclease RecJ. | 0.483 |
dinG | Cagg_2593 | Cagg_2156 | Cagg_2593 | DNA polymerase III, epsilon subunit; 3'-5' exonuclease. | PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: cau:Caur_1042 cyclic nucleotide-binding. | 0.527 |
dinG | polA | Cagg_2156 | Cagg_3590 | DNA polymerase III, epsilon subunit; 3'-5' exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.989 |
dinG | recX | Cagg_2156 | Cagg_1746 | DNA polymerase III, epsilon subunit; 3'-5' exonuclease. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.531 |