STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM70527.1TPR domain protein. (344 aa)    
Predicted Functional Partners:
EGM71738.1
Sensory box histidine kinase/response regulator.
  
 0.881
EGM70528.1
TPR domain protein.
      0.861
EGM71463.1
Sensory box histidine kinase/response regulator.
  
 0.722
EGM71541.1
Putative sensory/regulatory protein.
  
 
 0.709
EGM71277.1
BarA sensory histidine kinase (VarS GacS).
  
 
 0.702
EGM68043.1
Sensory box/GGDEF family protein.
  
 0.623
EGM68800.1
Sensory box/GGDEF domain/EAL domain protein.
  
 0.615
EGM69499.1
Sensory box/GGDEF family protein.
  
 0.543
EGM69500.1
Sensory box/GGDEF family protein.
  
 0.543
EGM68899.1
Sensory box protein.
  
 0.543
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.