STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAS8Growth arrest-specific protein 8. (477 aa)    
Predicted Functional Partners:
DNALI1
Dynein axonemal light intermediate chain 1.
  
 
 
 0.883
N305_11066
Coiled-coil domain-containing protein 30.
     
 0.757
ENSMVIP00005003886
annotation not available
     
 0.727
PPCDC
Phosphopantothenoylcysteine decarboxylase.
     
 0.727
ENSMVIP00005023436
annotation not available
  
   
 0.684
RSPH1
Radial spoke head 1.
   
 
 0.652
ENSMVIP00005018001
annotation not available
  
   
 0.639
RSPH3
Radial spoke head protein 3.
  
 
 
 0.618
IQUB
IQ and ubiquitin-like domain-containing protein.
   
 
 0.614
DRC7
Coiled-coil domain-containing protein lobo.
  
   
 0.613
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.