STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BUE8Uncharacterized protein. (2057 aa)    
Predicted Functional Partners:
A0A1Y2B255
Uncharacterized protein.
    
 0.890
A0A1Y2C385
Guanine nucleotide binding protein, alpha subunit.
    
 0.884
A0A1Y2CXG7
G-alpha-domain-containing protein.
    
 0.884
A0A1Y2B4Y8
Guanine nucleotide-binding protein, beta subunit.
     
 0.847
A0A1Y2CW69
Uncharacterized protein.
    
 0.785
A0A1Y2CDK3
Inositol-1-monophosphatase.
     
 0.779
A0A1Y2BQ53
Cyclic nucleotide-binding domain-containing protein.
     
 0.764
A0A1Y2BYX8
Calcineurin subunit B.
    
 0.760
A0A1Y2CEJ5
EF-hand.
    
 0.760
A0A1Y2CPN1
EF-hand.
    
 0.760
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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