STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C5B0WD_REPEATS_REGION domain-containing protein. (214 aa)    
Predicted Functional Partners:
A0A1Y2CRX2
Antiviral helicase.
    
 0.682
A0A1Y2D1Z7
CDC73-domain-containing protein.
    
 0.665
A0A1Y2CXN5
TPR-like protein.
    
 0.663
A0A1Y2C9U9
Leo1-domain-containing protein.
    
 0.662
A0A1Y2BA66
TPR-like protein.
    
 0.659
A0A1Y2C3H3
TPR-like protein.
    
 0.659
A0A1Y2CEF2
Uncharacterized protein.
   
 0.654
A0A1Y2BP41
Antiviral helicase.
    
 0.646
A0A1Y2CP14
ARM repeat-containing protein.
    
 0.644
A0A1Y2BD19
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.640
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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