STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CQ80Nexin_C domain-containing protein. (247 aa)    
Predicted Functional Partners:
A0A1Y2B252
t-SNARE coiled-coil homology domain-containing protein.
    
 0.690
A0A1Y2B9F9
Sorting nexin-3.
     
 0.688
A0A1Y2CK64
Snare-like protein; Belongs to the synaptobrevin family.
     
 0.627
A0A1Y2CN48
Uncharacterized protein.
   
 
  0.570
A0A1Y2CXQ3
t-SNARE.
     
 0.537
A0A1Y2C7S4
ARF/SAR superfamily; Belongs to the small GTPase superfamily. Arf family.
    
 0.513
A0A1Y2C8M4
ARF/SAR superfamily; Belongs to the small GTPase superfamily. Arf family.
    
 0.513
A0A1Y2CLB9
Putative ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.513
A0A1Y2BZ92
BAG domain-containing protein.
    
 0.510
A0A1Y2CX83
Kinesin-domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.497
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.