STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CYD5Nudix hydrolase domain-containing protein. (469 aa)    
Predicted Functional Partners:
A0A1Y2C722
Nudix hydrolase domain-containing protein.
   
 0.891
A0A1Y2BVN1
Nudix hydrolase domain-containing protein.
   
 0.890
A0A1Y2CFF6
Nicotinate/Quinolinate PRTase C-terminal domain-like protein.
   
 0.886
A0A1Y2B7W1
Uncharacterized protein.
   
 0.853
A0A1Y2B8V8
Uncharacterized protein.
   
 0.853
A0A1Y2CIL5
Nudix hydrolase domain-containing protein.
   
 0.853
A0A1Y2CBZ0
Epoxide hydrolase.
  
 
 0.849
A0A1Y2B8E4
Metallo-dependent phosphatase.
   
 0.839
A0A1Y2BQJ1
Metallo-dependent phosphatase.
   
 0.839
A0A1Y2BTB8
Metallo-dependent phosphatase.
   
 0.839
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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