STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_0714EAL and cyclic nucleotide-binding domain protein. (439 aa)    
Predicted Functional Partners:
AM1_0193
Diguanylate cyclase (GGDEF).
 
 
 0.979
AM1_3568
Diguanylate cyclase (GGDEF domain), putative.
 
 
 
 0.955
AM1_6199
Diguanylate cyclase (GGDEF domain), putative.
 
 
 
 0.947
AM1_5960
Diguanylate cyclase.
 
 0.945
AM1_0547
Diguanylate cyclase (GGDEF domain).
 
 0.884
AM1_6053
GGDEF family protein.
 
 
 0.857
AM1_3046
Diguanylate cyclase.
 
 
 0.838
AM1_5858
Diguanylate cyclase (GGDEF) domain protein.
 
 0.817
AM1_4772
GGDEF domain protein.
 
 
 0.802
AM1_3569
Diguanylate cyclase (GGDEF domain), putative.
 
 
 
 0.795
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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