Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AM1_1427 | AM1_5703 | AM1_1427 | AM1_5703 | Phosphoglycolate phosphatase, putative. | HAD-superfamily hydrolase, subfamily IA, variant 3. | 0.930 |
| AM1_1427 | pgp | AM1_1427 | AM1_2384 | Phosphoglycolate phosphatase, putative. | Phosphoglycolate phosphatase, putative. | 0.924 |
| AM1_1427 | rbcL | AM1_1427 | AM1_1785 | Phosphoglycolate phosphatase, putative. | Ribulose bisphosphate carboxylase large chain RbcL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | 0.905 |
| AM1_1427 | rbcS | AM1_1427 | AM1_1783 | Phosphoglycolate phosphatase, putative. | Ribulose bisphosphate carboxylase, small subunit RbcS. | 0.901 |
| AM1_1780 | AM1_1784 | AM1_1780 | AM1_1784 | Conserved hypothetical protein. | RbcX chaperonin protein. | 0.956 |
| AM1_1780 | ccmM | AM1_1780 | AM1_3052 | Conserved hypothetical protein. | Carbon dioxide concentrating mechanism protein CcmM. | 0.534 |
| AM1_1780 | ccmM-2 | AM1_1780 | AM1_5383 | Conserved hypothetical protein. | Carbon dioxide concentrating mechanism protein CcmM. | 0.775 |
| AM1_1780 | rbcL | AM1_1780 | AM1_1785 | Conserved hypothetical protein. | Ribulose bisphosphate carboxylase large chain RbcL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | 0.985 |
| AM1_1780 | rbcS | AM1_1780 | AM1_1783 | Conserved hypothetical protein. | Ribulose bisphosphate carboxylase, small subunit RbcS. | 0.720 |
| AM1_1784 | AM1_1780 | AM1_1784 | AM1_1780 | RbcX chaperonin protein. | Conserved hypothetical protein. | 0.956 |
| AM1_1784 | ccmM | AM1_1784 | AM1_3052 | RbcX chaperonin protein. | Carbon dioxide concentrating mechanism protein CcmM. | 0.585 |
| AM1_1784 | ccmM-2 | AM1_1784 | AM1_5383 | RbcX chaperonin protein. | Carbon dioxide concentrating mechanism protein CcmM. | 0.796 |
| AM1_1784 | rbcL | AM1_1784 | AM1_1785 | RbcX chaperonin protein. | Ribulose bisphosphate carboxylase large chain RbcL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | 0.924 |
| AM1_1784 | rbcS | AM1_1784 | AM1_1783 | RbcX chaperonin protein. | Ribulose bisphosphate carboxylase, small subunit RbcS. | 0.767 |
| AM1_5703 | AM1_1427 | AM1_5703 | AM1_1427 | HAD-superfamily hydrolase, subfamily IA, variant 3. | Phosphoglycolate phosphatase, putative. | 0.930 |
| AM1_5703 | pgp | AM1_5703 | AM1_2384 | HAD-superfamily hydrolase, subfamily IA, variant 3. | Phosphoglycolate phosphatase, putative. | 0.929 |
| AM1_5703 | rbcL | AM1_5703 | AM1_1785 | HAD-superfamily hydrolase, subfamily IA, variant 3. | Ribulose bisphosphate carboxylase large chain RbcL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | 0.905 |
| AM1_5703 | rbcS | AM1_5703 | AM1_1783 | HAD-superfamily hydrolase, subfamily IA, variant 3. | Ribulose bisphosphate carboxylase, small subunit RbcS. | 0.901 |
| ccmM | AM1_1780 | AM1_3052 | AM1_1780 | Carbon dioxide concentrating mechanism protein CcmM. | Conserved hypothetical protein. | 0.534 |
| ccmM | AM1_1784 | AM1_3052 | AM1_1784 | Carbon dioxide concentrating mechanism protein CcmM. | RbcX chaperonin protein. | 0.585 |
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