STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_1934EAL domain protein. (254 aa)    
Predicted Functional Partners:
AM1_0193
Diguanylate cyclase (GGDEF).
 
    0.947
AM1_1629
Diguanylate cyclase domain protein.
 
 
 
 0.846
AM1_0582
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
 0.804
AM1_4979
Response regulator receiver modulated diguanylate cyclase protein, putative.
 
 
   0.716
AM1_3568
Diguanylate cyclase (GGDEF domain), putative.
 
 
   0.694
AM1_4827
Ggdef family protein.
  
    0.631
AM1_5960
Diguanylate cyclase.
  
 0.631
AM1_3498
Diguanylate cyclase (GGDEF) domain protein.
 
 
   0.629
AM1_4571
Diguanylate cyclase (GGDEF domain).
  
 0.619
AM1_6053
GGDEF family protein.
 
    0.618
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.