STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2653Methanol dehydrogenase regulatory protein, putative. (309 aa)    
Predicted Functional Partners:
ribF
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
       0.729
AM1_5278
Transglutaminase-like superfamily protein, putative.
 
   
 0.619
AM1_2651
Metallo-beta-lactamase superfamily protein.
       0.607
AM1_1649
Transglutaminase-like protein, putative.
 
   
 0.498
AM1_2742
Conserved hypothetical protein.
 
  
 0.475
AM1_2654
Conserved hypothetical protein.
       0.423
AM1_2362
Conserved hypothetical protein.
  
 0.416
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.406
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.