STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2986Carbohydrate-selective porin, OprB family; Belongs to the OprB family. (603 aa)    
Predicted Functional Partners:
AM1_4040
Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.774
AM1_0532
Conserved hypothetical protein.
 
     0.761
AM1_3666
Transcriptional regulator domain protein.
  
     0.756
AM1_0587
Surface antigen variable number.
  
   
 0.755
AM1_1281
Conserved hypothetical protein.
  
     0.747
AM1_4418
Conserved hypothetical protein.
  
     0.744
AM1_5314
Conserved hypothetical protein.
  
     0.739
AM1_6174
Conserved hypothetical protein.
  
     0.734
AM1_0703
Conserved hypothetical protein.
  
     0.732
AM1_3575
Conserved hypothetical protein.
  
     0.731
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.