Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM1_1572 | AM1_1813 | AM1_1572 | AM1_1813 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
AM1_1572 | AM1_3151 | AM1_1572 | AM1_3151 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.621 |
AM1_1813 | AM1_1572 | AM1_1813 | AM1_1572 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
AM1_1813 | AM1_3151 | AM1_1813 | AM1_3151 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.662 |
AM1_3149 | AM1_3151 | AM1_3149 | AM1_3151 | Glyoxalase family protein. | Conserved hypothetical protein. | 0.492 |
AM1_3151 | AM1_1572 | AM1_3151 | AM1_1572 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.621 |
AM1_3151 | AM1_1813 | AM1_3151 | AM1_1813 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.662 |
AM1_3151 | AM1_3149 | AM1_3151 | AM1_3149 | Conserved hypothetical protein. | Glyoxalase family protein. | 0.492 |
AM1_3151 | AM1_3508 | AM1_3151 | AM1_3508 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.460 |
AM1_3151 | AM1_3909 | AM1_3151 | AM1_3909 | Conserved hypothetical protein. | Conserved hypothetical protein; Shows homology with haemagglutination activity domain protein. | 0.456 |
AM1_3151 | AM1_4652 | AM1_3151 | AM1_4652 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.451 |
AM1_3151 | AM1_4983 | AM1_3151 | AM1_4983 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to haemagglutination protein family. | 0.494 |
AM1_3151 | ftsH-3 | AM1_3151 | AM1_2130 | Conserved hypothetical protein. | ATP-dependent metalloprotease FtsH-like protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.455 |
AM1_3151 | ftsH-4 | AM1_3151 | AM1_2436 | Conserved hypothetical protein. | ATP-dependent metalloprotease FtsH-like protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.442 |
AM1_3151 | ftsH-6 | AM1_3151 | AM1_4364 | Conserved hypothetical protein. | ATP-dependent metalloprotease FtsH-like protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.432 |
AM1_3508 | AM1_3151 | AM1_3508 | AM1_3151 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.460 |
AM1_3909 | AM1_3151 | AM1_3909 | AM1_3151 | Conserved hypothetical protein; Shows homology with haemagglutination activity domain protein. | Conserved hypothetical protein. | 0.456 |
AM1_4652 | AM1_3151 | AM1_4652 | AM1_3151 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.451 |
AM1_4983 | AM1_3151 | AM1_4983 | AM1_3151 | Conserved hypothetical protein; Similar to haemagglutination protein family. | Conserved hypothetical protein. | 0.494 |
ftsH-3 | AM1_3151 | AM1_2130 | AM1_3151 | ATP-dependent metalloprotease FtsH-like protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Conserved hypothetical protein. | 0.455 |
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