STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_3218TPR domain protein. (418 aa)    
Predicted Functional Partners:
AM1_3942
TPR repeat protein.
 
   
 0.739
AM1_5808
Conserved hypothetical protein.
 
 0.725
AM1_1406
TPR domain protein.
 
0.681
AM1_4591
TPR domain protein.
 
 0.662
AM1_3123
Peptidase, M50 family.
 
 
   0.661
AM1_4748
TPR domain protein.
 
 0.616
AM1_5388
TPR domain protein.
 
 0.606
AM1_4470
Conserved hypothetical protein.
 
 0.599
AM1_2387
Two-component sensor histidine kinase.
 
  
 0.549
AM1_3253
TPR domain protein.
 0.544
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.