Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM1_2057 | AM1_3555 | AM1_2057 | AM1_3555 | DnaK family protein; Belongs to the heat shock protein 70 family. | Conserved hypothetical protein. | 0.725 |
AM1_2057 | AM1_5927 | AM1_2057 | AM1_5927 | DnaK family protein; Belongs to the heat shock protein 70 family. | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | 0.960 |
AM1_2057 | AM1_6307 | AM1_2057 | AM1_6307 | DnaK family protein; Belongs to the heat shock protein 70 family. | Transcriptional regulator with ATPase activity. | 0.687 |
AM1_2057 | grpE | AM1_2057 | AM1_0421 | DnaK family protein; Belongs to the heat shock protein 70 family. | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...] | 0.935 |
AM1_3554 | AM1_3555 | AM1_3554 | AM1_3555 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.542 |
AM1_3555 | AM1_2057 | AM1_3555 | AM1_2057 | Conserved hypothetical protein. | DnaK family protein; Belongs to the heat shock protein 70 family. | 0.725 |
AM1_3555 | AM1_3554 | AM1_3555 | AM1_3554 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.542 |
AM1_3555 | AM1_4404 | AM1_3555 | AM1_4404 | Conserved hypothetical protein. | Pentapeptide repeat protein. | 0.774 |
AM1_3555 | AM1_4728 | AM1_3555 | AM1_4728 | Conserved hypothetical protein. | Pentapeptide repeat protein. | 0.773 |
AM1_3555 | AM1_5927 | AM1_3555 | AM1_5927 | Conserved hypothetical protein. | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | 0.848 |
AM1_3555 | AM1_6307 | AM1_3555 | AM1_6307 | Conserved hypothetical protein. | Transcriptional regulator with ATPase activity. | 0.551 |
AM1_3555 | dnaK | AM1_3555 | AM1_0422 | Conserved hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.725 |
AM1_3555 | dnaK-2 | AM1_3555 | AM1_2440 | Conserved hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.725 |
AM1_3555 | dnaK-3 | AM1_3555 | AM1_5692 | Conserved hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.725 |
AM1_3555 | grpE | AM1_3555 | AM1_0421 | Conserved hypothetical protein. | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...] | 0.627 |
AM1_4404 | AM1_3555 | AM1_4404 | AM1_3555 | Pentapeptide repeat protein. | Conserved hypothetical protein. | 0.774 |
AM1_4728 | AM1_3555 | AM1_4728 | AM1_3555 | Pentapeptide repeat protein. | Conserved hypothetical protein. | 0.773 |
AM1_5927 | AM1_2057 | AM1_5927 | AM1_2057 | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | DnaK family protein; Belongs to the heat shock protein 70 family. | 0.960 |
AM1_5927 | AM1_3555 | AM1_5927 | AM1_3555 | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | Conserved hypothetical protein. | 0.848 |
AM1_5927 | AM1_6307 | AM1_5927 | AM1_6307 | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | Transcriptional regulator with ATPase activity. | 0.656 |
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