STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_6142NADP oxidoreductase coenzyme f420-dependent. (225 aa)    
Predicted Functional Partners:
AM1_3152
Oxidoreductase, putative; Has high similarity to NADPH oxidase from humans.
      
 0.618
AM1_6141
3-oxoacyl-(acyl carrier protein) reductase, putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.598
AM1_6144
NmrA family protein.
 
     0.554
AM1_2102
Conserved hypothetical protein.
  
     0.548
AM1_6143
Oxidoreductase, short chain dehydrogenase/reductase family protein.
       0.529
AM1_2666
NmrA family protein.
  
     0.507
AM1_1657
Conserved hypothetical protein.
  
   
 0.500
AM1_6367
Conserved hypothetical protein; Similar to transcriptional regulator.
  
     0.496
AM1_0573
Transcriptional regulator, TetR family, putative.
  
     0.482
AM1_6145
nmrA-family protein.
 
     0.459
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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