STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_16987Uncharacterized protein. (1327 aa)    
Predicted Functional Partners:
B0A54_13682
AP-1 complex subunit gamma.
   
 
 0.692
B0A54_09396
AP-1 complex subunit gamma.
   
 
 0.692
B0A54_02471
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
   0.672
B0A54_10106
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
   
 
 0.503
B0A54_05156
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
   
 
 0.503
B0A54_15281
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.501
B0A54_13046
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.501
B0A54_17944
Uncharacterized protein.
    
   0.439
B0A54_16592
Uncharacterized protein.
    
   0.439
B0A54_07339
Zn(2)-C6 fungal-type domain-containing protein.
    
   0.439
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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