B0A54_07366 protein (Friedmanniomyces endolithicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A54_07366

Uncharacterized protein. (121 aa)

Predicted Functional Partners:

B0A54_17131

0.977

B0A54_09332

0.956

B0A54_10376

0.946

B0A54_09002

0.946

B0A54_15474

0.925

B0A54_15596

0.925

B0A54_14811

0.913

B0A54_08149

0.913

B0A54_02682

0.913

B0A54_17749

0.912

Your Current Organism:

Friedmanniomyces endolithicus

NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A54_02682	B0A54_07366	A0A4U0VDX7	A0A4U0V133	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.913
B0A54_02682	B0A54_09332	A0A4U0VDX7	A0A4U0U0C3	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.501
B0A54_02682	B0A54_14811	A0A4U0VDX7	A0A4U0U9W7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.994
B0A54_02682	B0A54_17749	A0A4U0VDX7	A0A4U0TPD7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.949
B0A54_07366	B0A54_02682	A0A4U0V133	A0A4U0VDX7	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.913
B0A54_07366	B0A54_08149	A0A4U0V133	A0A4U0V094	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.913
B0A54_07366	B0A54_09002	A0A4U0V133	A0A4U0UX46	Uncharacterized protein.	EF-hand domain-containing protein.	0.946
B0A54_07366	B0A54_09332	A0A4U0V133	A0A4U0U0C3	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.956
B0A54_07366	B0A54_10376	A0A4U0V133	A0A4U0UTM7	Uncharacterized protein.	EF-hand domain-containing protein.	0.946
B0A54_07366	B0A54_14811	A0A4U0V133	A0A4U0U9W7	Uncharacterized protein.	Uncharacterized protein.	0.913
B0A54_07366	B0A54_15474	A0A4U0V133	A0A4U0UB79	Uncharacterized protein.	Uncharacterized protein.	0.925
B0A54_07366	B0A54_15596	A0A4U0V133	A0A4U0UBR3	Uncharacterized protein.	Uncharacterized protein.	0.925
B0A54_07366	B0A54_17131	A0A4U0V133	A0A4U0U092	Uncharacterized protein.	Uncharacterized protein.	0.977
B0A54_07366	B0A54_17749	A0A4U0V133	A0A4U0TPD7	Uncharacterized protein.	Uncharacterized protein.	0.912
B0A54_08149	B0A54_07366	A0A4U0V094	A0A4U0V133	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.913
B0A54_08149	B0A54_09332	A0A4U0V094	A0A4U0U0C3	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.501
B0A54_08149	B0A54_14811	A0A4U0V094	A0A4U0U9W7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.994
B0A54_08149	B0A54_17749	A0A4U0V094	A0A4U0TPD7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.949
B0A54_09002	B0A54_07366	A0A4U0UX46	A0A4U0V133	EF-hand domain-containing protein.	Uncharacterized protein.	0.946
B0A54_09002	B0A54_14811	A0A4U0UX46	A0A4U0U9W7	EF-hand domain-containing protein.	Uncharacterized protein.	0.946