STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A54_01827Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
B0A54_06470
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.945
B0A54_03685
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.945
B0A54_01390
Nuclear transport factor 2.
    
 
 0.648
B0A54_00131
Nuclear transport factor 2.
    
 
 0.648
B0A54_16499
Uncharacterized protein.
    
 
 0.632
B0A54_16500
Ran-specific GTPase-activating protein 1.
    
 
 0.632
B0A54_12765
Uncharacterized protein.
    
 
 0.632
B0A54_12764
RanBD1 domain-containing protein.
    
 
 0.632
B0A54_16419
RanBD1 domain-containing protein.
    
 
 0.582
B0A54_14810
RanBD1 domain-containing protein.
    
 
 0.582
Your Current Organism:
Friedmanniomyces endolithicus
NCBI taxonomy Id: 329885
Other names: CCFEE 5208, F. endolithicus
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