STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_1176Hypothetical protein; Similar to gi:15922855. (154 aa)    
Predicted Functional Partners:
Saci_1175
Conserved flagellar protein F.
  
 
 0.997
Saci_1173
Conserved Archaeal protein.
  
  
 0.961
flaJ
Flagella-related protein J.
  
  
 0.952
Saci_1174
Flagella-related protein H.
  
  
 0.916
Saci_1177
Conserved protein.
     
 0.889
Saci_1178
Conserved flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.832
Saci_1494
Type II/IV secretion system protein.
  
  
 0.692
Saci_2317
Type II/IV secretion system protein.
  
  
 0.692
Saci_2193
Hypothetical protein; Similar to gi:15922315.
      
 0.472
Saci_1179
Conserved membrane protein.
       0.406
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.