Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0545 | Saci_0884 | Saci_0545 | Saci_0884 | Conserved Archaeal protein. | Serine/threonine protein phosphatase catalytic subunit. | 0.904 |
Saci_0545 | Saci_1193 | Saci_0545 | Saci_1193 | Conserved Archaeal protein. | Conserved protein. | 0.673 |
Saci_0545 | Saci_1281 | Saci_0545 | Saci_1281 | Conserved Archaeal protein. | Conserved putative ATP binding protein; Members of family are found in a range of archaea and eukaryotes and have hypothesised ATP binding activity. | 0.879 |
Saci_0884 | Saci_0545 | Saci_0884 | Saci_0545 | Serine/threonine protein phosphatase catalytic subunit. | Conserved Archaeal protein. | 0.904 |
Saci_0884 | Saci_1193 | Saci_0884 | Saci_1193 | Serine/threonine protein phosphatase catalytic subunit. | Conserved protein. | 0.651 |
Saci_0884 | Saci_1211 | Saci_0884 | Saci_1211 | Serine/threonine protein phosphatase catalytic subunit. | Conserved protein. | 0.449 |
Saci_0884 | Saci_1281 | Saci_0884 | Saci_1281 | Serine/threonine protein phosphatase catalytic subunit. | Conserved putative ATP binding protein; Members of family are found in a range of archaea and eukaryotes and have hypothesised ATP binding activity. | 0.945 |
Saci_0965 | Saci_1193 | Saci_0965 | Saci_1193 | Conserved Archaeal protein. | Conserved protein. | 0.654 |
Saci_1193 | Saci_0545 | Saci_1193 | Saci_0545 | Conserved protein. | Conserved Archaeal protein. | 0.673 |
Saci_1193 | Saci_0884 | Saci_1193 | Saci_0884 | Conserved protein. | Serine/threonine protein phosphatase catalytic subunit. | 0.651 |
Saci_1193 | Saci_0965 | Saci_1193 | Saci_0965 | Conserved protein. | Conserved Archaeal protein. | 0.654 |
Saci_1193 | Saci_1209 | Saci_1193 | Saci_1209 | Conserved protein. | Conserved protein. | 0.673 |
Saci_1193 | Saci_1211 | Saci_1193 | Saci_1211 | Conserved protein. | Conserved protein. | 0.691 |
Saci_1193 | Saci_1281 | Saci_1193 | Saci_1281 | Conserved protein. | Conserved putative ATP binding protein; Members of family are found in a range of archaea and eukaryotes and have hypothesised ATP binding activity. | 0.868 |
Saci_1193 | Saci_2342 | Saci_1193 | Saci_2342 | Conserved protein. | NADH-quinone oxidoreductase. | 0.595 |
Saci_1193 | Saci_2345 | Saci_1193 | Saci_2345 | Conserved protein. | NADH dehydrogenase I chain C. | 0.605 |
Saci_1193 | arnR | Saci_1193 | Saci_1180 | Conserved protein. | Conserved protein; Involved in regulation of archaellar gene expression. Activates flaB transcription upon nutrient starvation by acting on the flaB promoter. | 0.653 |
Saci_1193 | nqo14 | Saci_1193 | Saci_2338 | Conserved protein. | NADH-quinone oxidoreductase chain 14. | 0.724 |
Saci_1209 | Saci_1193 | Saci_1209 | Saci_1193 | Conserved protein. | Conserved protein. | 0.673 |
Saci_1209 | Saci_1211 | Saci_1209 | Saci_1211 | Conserved protein. | Conserved protein. | 0.661 |
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