STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saci_1193Conserved protein. (663 aa)    
Predicted Functional Partners:
Saci_1281
Conserved putative ATP binding protein; Members of family are found in a range of archaea and eukaryotes and have hypothesised ATP binding activity.
  
 0.868
nqo14
NADH-quinone oxidoreductase chain 14.
   
 
 0.724
Saci_1211
Conserved protein.
 
 
 
 0.691
Saci_0545
Conserved Archaeal protein.
  
 0.673
Saci_1209
Conserved protein.
 
 
   0.673
Saci_0965
Conserved Archaeal protein.
  
 
 0.654
arnR
Conserved protein; Involved in regulation of archaellar gene expression. Activates flaB transcription upon nutrient starvation by acting on the flaB promoter.
      
 0.653
Saci_0884
Serine/threonine protein phosphatase catalytic subunit.
 
 
 0.651
Saci_2345
NADH dehydrogenase I chain C.
   
  0.605
Saci_2342
NADH-quinone oxidoreductase.
   
   0.595
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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