Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Saci_1308 | dys | Saci_1308 | Saci_1316 | Short chain dehydrogenase; Similar to sp:P25529 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159). | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 0.587 |
| Saci_1308 | eif5a | Saci_1308 | Saci_1311 | Short chain dehydrogenase; Similar to sp:P25529 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159). | Translation initiation factor 5A; Functions by promoting the formation of the first peptide bond. | 0.836 |
| Saci_1308 | rtcB | Saci_1308 | Saci_1317 | Short chain dehydrogenase; Similar to sp:P25529 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159). | Universally conserved protein; Uncharacterized protein family UPF002; Belongs to the RtcB family. | 0.425 |
| Saci_1308 | top6A | Saci_1308 | Saci_1314 | Short chain dehydrogenase; Similar to sp:P25529 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159). | DNA topoisomerase VI, subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. | 0.511 |
| Saci_1308 | top6B | Saci_1308 | Saci_1315 | Short chain dehydrogenase; Similar to sp:P25529 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159). | DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | 0.417 |
| argS | dys | Saci_1396 | Saci_1316 | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 0.629 |
| argS | eif5a | Saci_1396 | Saci_1311 | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Translation initiation factor 5A; Functions by promoting the formation of the first peptide bond. | 0.694 |
| argS | flpA | Saci_1396 | Saci_1346 | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Fribrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.561 |
| argS | pheS | Saci_1396 | Saci_1511 | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | phenylalanyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily. | 0.864 |
| argS | speE | Saci_1396 | Saci_0643 | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.577 |
| dys | Saci_1308 | Saci_1316 | Saci_1308 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Short chain dehydrogenase; Similar to sp:P25529 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159). | 0.587 |
| dys | argS | Saci_1316 | Saci_1396 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.629 |
| dys | eif5a | Saci_1316 | Saci_1311 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Translation initiation factor 5A; Functions by promoting the formation of the first peptide bond. | 0.998 |
| dys | flpA | Saci_1316 | Saci_1346 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Fribrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.712 |
| dys | pheS | Saci_1316 | Saci_1511 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | phenylalanyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily. | 0.602 |
| dys | rpl10e | Saci_1316 | Saci_0176 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 50S ribosomal protein L10E; Belongs to the universal ribosomal protein uL16 family. | 0.623 |
| dys | rtcB | Saci_1316 | Saci_1317 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Universally conserved protein; Uncharacterized protein family UPF002; Belongs to the RtcB family. | 0.869 |
| dys | speE | Saci_1316 | Saci_0643 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.608 |
| dys | top6A | Saci_1316 | Saci_1314 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | DNA topoisomerase VI, subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. | 0.969 |
| dys | top6B | Saci_1316 | Saci_1315 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | 0.814 |
page 1 of 4