STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxESulfocyanin, blue copper protein; The 4 redox proteins SoxE, SoxF, SoxG and SoxH probably form part of a membrane respiratory complex together with SoxM, a catalytic subunit of cytochrome oxidase. (204 aa)    
Predicted Functional Partners:
sdhD
Succinate dehydrogenase subunit D.
      
 0.731
soxC-3
Cytochrome b.
     
 0.638
Saci_0265
Phosphate transporter.
      
 0.596
soxH
Cytochrome c oxidase subunit II.
       0.562
Saci_2261
Conserved Archaeal Rieske domain protein.
       0.553
Saci_2258
Conserved membrane protein.
       0.549
Your Current Organism:
Sulfolobus acidocaldarius DSM 639
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius DSM 639, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius NCIB 11770
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