Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saci_0883 | Saci_2320 | Saci_0883 | Saci_2320 | Ammonia transporter. | Hypothetical protein; Contains conserved region in glutamate synthase. | 0.832 |
Saci_0883 | Saci_2321 | Saci_0883 | Saci_2321 | Ammonia transporter. | Glutamine amidotransferase class-II domain protein. | 0.699 |
Saci_0883 | carB | Saci_0883 | Saci_1620 | Ammonia transporter. | Carbamoyl-phosphate synthase L chain. | 0.425 |
Saci_0883 | gdhA | Saci_0883 | Saci_0155 | Ammonia transporter. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.682 |
Saci_2320 | Saci_0883 | Saci_2320 | Saci_0883 | Hypothetical protein; Contains conserved region in glutamate synthase. | Ammonia transporter. | 0.832 |
Saci_2320 | Saci_2321 | Saci_2320 | Saci_2321 | Hypothetical protein; Contains conserved region in glutamate synthase. | Glutamine amidotransferase class-II domain protein. | 0.994 |
Saci_2320 | Saci_2322 | Saci_2320 | Saci_2322 | Hypothetical protein; Contains conserved region in glutamate synthase. | Conserved protein. | 0.626 |
Saci_2320 | btuF | Saci_2320 | Saci_2323 | Hypothetical protein; Contains conserved region in glutamate synthase. | Vitamin B12 transport protein. | 0.636 |
Saci_2320 | carB | Saci_2320 | Saci_1620 | Hypothetical protein; Contains conserved region in glutamate synthase. | Carbamoyl-phosphate synthase L chain. | 0.691 |
Saci_2320 | fusA | Saci_2320 | Saci_0603 | Hypothetical protein; Contains conserved region in glutamate synthase. | Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...] | 0.646 |
Saci_2320 | gdhA | Saci_2320 | Saci_0155 | Hypothetical protein; Contains conserved region in glutamate synthase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.953 |
Saci_2320 | leu2 | Saci_2320 | Saci_0253 | Hypothetical protein; Contains conserved region in glutamate synthase. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.629 |
Saci_2320 | pyrG | Saci_2320 | Saci_0801 | Hypothetical protein; Contains conserved region in glutamate synthase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.631 |
Saci_2320 | trpA | Saci_2320 | Saci_1422 | Hypothetical protein; Contains conserved region in glutamate synthase. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.656 |
Saci_2321 | Saci_0883 | Saci_2321 | Saci_0883 | Glutamine amidotransferase class-II domain protein. | Ammonia transporter. | 0.699 |
Saci_2321 | Saci_2320 | Saci_2321 | Saci_2320 | Glutamine amidotransferase class-II domain protein. | Hypothetical protein; Contains conserved region in glutamate synthase. | 0.994 |
Saci_2321 | Saci_2322 | Saci_2321 | Saci_2322 | Glutamine amidotransferase class-II domain protein. | Conserved protein. | 0.626 |
Saci_2321 | btuF | Saci_2321 | Saci_2323 | Glutamine amidotransferase class-II domain protein. | Vitamin B12 transport protein. | 0.633 |
Saci_2321 | carB | Saci_2321 | Saci_1620 | Glutamine amidotransferase class-II domain protein. | Carbamoyl-phosphate synthase L chain. | 0.593 |
Saci_2321 | fusA | Saci_2321 | Saci_0603 | Glutamine amidotransferase class-II domain protein. | Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...] | 0.610 |
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