Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
UREG_00277 | UREG_01236 | C4JD72 | C4JGY5 | 3-dehydroshikimate dehydratase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.927 |
UREG_00277 | UREG_05130 | C4JD72 | C4JRP1 | 3-dehydroshikimate dehydratase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.927 |
UREG_00277 | UREG_05848 | C4JD72 | C4JTQ9 | 3-dehydroshikimate dehydratase. | Uncharacterized protein. | 0.902 |
UREG_01098 | UREG_05848 | C4JG18 | C4JTQ9 | Amidase domain-containing protein. | Uncharacterized protein. | 0.900 |
UREG_01236 | UREG_00277 | C4JGY5 | C4JD72 | 4-hydroxyphenylpyruvate dioxygenase. | 3-dehydroshikimate dehydratase. | 0.927 |
UREG_01236 | UREG_05130 | C4JGY5 | C4JRP1 | 4-hydroxyphenylpyruvate dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.902 |
UREG_01236 | UREG_05848 | C4JGY5 | C4JTQ9 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.911 |
UREG_01385 | UREG_05848 | C4JHW0 | C4JTQ9 | Amidase domain-containing protein. | Uncharacterized protein. | 0.900 |
UREG_02546 | UREG_05848 | C4JGN4 | C4JTQ9 | Amidase domain-containing protein. | Uncharacterized protein. | 0.900 |
UREG_04524 | UREG_05848 | C4JPE2 | C4JTQ9 | Amidase domain-containing protein. | Uncharacterized protein. | 0.900 |
UREG_04636 | UREG_05848 | C4JQ82 | C4JTQ9 | Amidase domain-containing protein. | Uncharacterized protein. | 0.900 |
UREG_05130 | UREG_00277 | C4JRP1 | C4JD72 | 4-hydroxyphenylpyruvate dioxygenase. | 3-dehydroshikimate dehydratase. | 0.927 |
UREG_05130 | UREG_01236 | C4JRP1 | C4JGY5 | 4-hydroxyphenylpyruvate dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.902 |
UREG_05130 | UREG_05848 | C4JRP1 | C4JTQ9 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.911 |
UREG_05848 | UREG_00277 | C4JTQ9 | C4JD72 | Uncharacterized protein. | 3-dehydroshikimate dehydratase. | 0.902 |
UREG_05848 | UREG_01098 | C4JTQ9 | C4JG18 | Uncharacterized protein. | Amidase domain-containing protein. | 0.900 |
UREG_05848 | UREG_01236 | C4JTQ9 | C4JGY5 | Uncharacterized protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.911 |
UREG_05848 | UREG_01385 | C4JTQ9 | C4JHW0 | Uncharacterized protein. | Amidase domain-containing protein. | 0.900 |
UREG_05848 | UREG_02546 | C4JTQ9 | C4JGN4 | Uncharacterized protein. | Amidase domain-containing protein. | 0.900 |
UREG_05848 | UREG_04524 | C4JTQ9 | C4JPE2 | Uncharacterized protein. | Amidase domain-containing protein. | 0.900 |
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