STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_05848Uncharacterized protein. (516 aa)    
Predicted Functional Partners:
UREG_01236
4-hydroxyphenylpyruvate dioxygenase.
   
 
  0.911
UREG_05130
4-hydroxyphenylpyruvate dioxygenase.
   
 
  0.911
UREG_00277
3-dehydroshikimate dehydratase.
    
 0.902
UREG_01098
Amidase domain-containing protein.
    
  0.900
UREG_02546
Amidase domain-containing protein.
    
  0.900
UREG_01385
Amidase domain-containing protein.
    
  0.900
UREG_04524
Amidase domain-containing protein.
    
  0.900
UREG_04636
Amidase domain-containing protein.
    
  0.900
UREG_06821
Amidase domain-containing protein.
    
  0.900
UREG_06376
Amidase domain-containing protein.
    
  0.900
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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