STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_07110GTPase activating protein. (876 aa)    
Predicted Functional Partners:
VFPBJ_10250
RAS small monomeric GTPase Rab6.
    
 0.778
PCL_03027
Geranylgeranyl transferase type-2 subunit alpha.
 
      0.722
VFPBJ_05937
GTP-binding protein ypt1.
    
 0.681
VFPFJ_09438
Reduced viability upon starvation protein.
    
 
 0.618
VFPBJ_00623
TBC domain-containingprotein.
      
 0.606
VFPBJ_09393
GTPase-activating protein GYP1.
    
 
 0.485
PCL_05250
Arsenite resistance protein Ars2.
  
     0.479
PCL_06127
Protein hob3.
    
 
 0.472
VFPFJ_08220
GTPase-activating protein GYP7.
      
 0.472
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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