STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_02312RSC complex subunit (RSC1). (937 aa)    
Predicted Functional Partners:
VFPBJ_00591
RSC complex subunit (RSC8).
   
 0.955
VFPBJ_03302
SWI-SNF complex subunit.
    
 0.950
VFPFJ_05614
SNF2-family ATP dependent chromatin remodeling factor snf21.
   
0.949
VFPBJ_02788
RSC complex subunit Sfh1.
    
 0.931
PCL_01385
RSC complex subunit Rsc9.
   
 
 0.922
VFPFJ_03422
Chromatin structure-remodeling complex protein RSC7.
    
 
 0.921
VFPFJ_00933
Chromatin remodeling complex subunit (Arp9); Belongs to the actin family.
    
 
 0.916
VFPBJ_05997
SWI/SNF complex protein.
    
 0.882
VFPBJ_08508
Actin; Belongs to the actin family.
   
 0.861
VFPFJ_00974
GRF zinc finger domain-containing protein.
    
 0.822
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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