STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL80425.1Protein of unknown function. (386 aa)    
Predicted Functional Partners:
SFL81905.1
MFS transporter, YQGE family, putative transporter.
  
     0.697
SFL85831.1
Hypothetical protein.
  
     0.628
SFL84432.1
Hypothetical protein.
  
     0.622
SFM00695.1
Sporulation lipoprotein, YhcN/YlaJ family.
  
     0.605
SFM48345.1
Hypothetical protein.
  
     0.586
SFL40680.1
YheC/D like ATP-grasp.
  
     0.543
SFL83989.1
Stage V sporulation protein AA.
  
     0.523
SFM05881.1
Stage VI sporulation protein D.
  
     0.516
SFL84007.1
Stage V sporulation protein AB.
  
     0.515
SFL40767.1
Hypothetical protein.
  
     0.514
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.