STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007252Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
CCH79_00009024
Uncharacterized protein.
   
 0.990
ENSGAFP00000031908
annotation not available
    
 0.926
CCH79_00011579
Uncharacterized protein.
    
 0.919
ENSGAFP00000028171
annotation not available
    
 0.918
CCH79_00011907
Uncharacterized protein.
    
 0.907
CCH79_00012249
Tyrosine-protein kinase receptor.
    
  0.905
ENSGAFP00000016164
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.905
CCH79_00007802
Uncharacterized protein.
   
 
  0.893
CCH79_00006182
Tyrosine-protein kinase receptor.
    
  0.892
SH3GLB2
BAR domain-containing protein.
     
0.883
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.