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STRINGSTRING
Neut_0007 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0007" - KEGG: rme:Rmet_2400 transcriptional regulator, LysR family in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0007KEGG- rme-Rmet_2400 transcriptional regulator, LysR family (124 aa)    
Predicted Functional Partners:
Neut_0008
PFAM- LysR, substrate-binding; KEGG- eba-c1A250 regulatory protein, LysR-family (219 aa)
   
     
  0.779
Neut_0009
Transcriptional regulator, XRE family protein; PFAM- helix-turn-helix domain protein; KEGG- eba-ebB68 hypothetical protein (100 aa)
   
          0.768
Neut_0126
KEGG- xfa-XF1787 hypothetical protein (249 aa)
   
          0.763
Neut_0072
KEGG- xcv-XCV2359 hypothetical protein (121 aa)
   
          0.748
Neut_0112
KEGG- eba-ebA2454 hypothetical protein (271 aa)
   
          0.746
Neut_0123
KEGG- eba-ebA2468 hypothetical protein (86 aa)
   
          0.743
Neut_0074
KEGG- xcb-XC_2025 hypothetical protein (114 aa)
   
          0.740
Neut_0110
KEGG- rme-Rmet_2322 hypothetical protein (223 aa)
   
          0.724
Neut_0107
KEGG- bxe-Bxe_A1204 hypothetical protein (219 aa)
   
          0.720
Neut_0093
KEGG- xcv-XCV2374 hypothetical protein (77 aa)
   
          0.710
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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