STRINGSTRING
Neut_0011 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0011" - Transcriptional regulator, LysR family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0011Transcriptional regulator, LysR family protein (302 aa)    
Predicted Functional Partners:
Neut_1373
Transcriptional regulator, LysR family protein (291 aa)
   
          0.733
Neut_0126
Hypothetical protein (249 aa)
   
          0.633
Neut_0102
Hypothetical protein (216 aa)
   
          0.617
Neut_0012
Transposase IS3/IS911 family protein (107 aa)
              0.617
Neut_0707
Transcriptional regulator, LysR family protein (310 aa)
   
          0.610
Neut_0009
Transcriptional regulator, XRE family protein (100 aa)
   
          0.603
Neut_0074
Hypothetical protein (114 aa)
   
          0.576
Neut_0072
Hypothetical protein (121 aa)
   
          0.520
Neut_0080
Hypothetical protein (250 aa)
   
          0.508
Neut_0013
Integrase catalytic subunit (283 aa)
              0.499
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (7%) [HD]