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Neut_0011 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0011" - Transcriptional regulator, LysR family in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0011Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- rme-Rmet_2400 transcriptional regulator, LysR family (302 aa)    
Predicted Functional Partners:
Neut_0012
PFAM- transposase IS3/IS911 family protein; KEGG- neu-NE0749 transposase IS911 HTH and LZ region (107 aa)
     
      0.609
Neut_0009
Transcriptional regulator, XRE family protein; PFAM- helix-turn-helix domain protein; KEGG- eba-ebB68 hypothetical protein (100 aa)
   
          0.591
Neut_0126
KEGG- xfa-XF1787 hypothetical protein (249 aa)
   
          0.532
Neut_0010
PFAM- Redoxin domain protein; KEGG- rme-Rmet_2395 thioredoxin-like protein (277 aa)
 
        0.520
Neut_0072
KEGG- xcv-XCV2359 hypothetical protein (121 aa)
   
          0.492
Neut_0013
PFAM- Integrase, catalytic region; KEGG- neu-NE2532 integrase, catalytic core (283 aa)
              0.466
Neut_0112
KEGG- eba-ebA2454 hypothetical protein (271 aa)
   
          0.458
Neut_0123
KEGG- eba-ebA2468 hypothetical protein (86 aa)
   
          0.431
Neut_0074
KEGG- xcb-XC_2025 hypothetical protein (114 aa)
   
          0.430
Neut_0107
KEGG- bxe-Bxe_A1204 hypothetical protein (219 aa)
   
          0.420
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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