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Neut_0013 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0013" - PFAM: Integrase, catalytic region in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0013PFAM- Integrase, catalytic region; KEGG- neu-NE2532 integrase, catalytic core (283 aa)    
Predicted Functional Partners:
Neut_0012
PFAM- transposase IS3/IS911 family protein; KEGG- neu-NE0749 transposase IS911 HTH and LZ region (107 aa)
   
        0.672
Neut_0011
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- rme-Rmet_2400 transcriptional regulator, LysR family (302 aa)
              0.466
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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